Commit 010f702e authored by Lucile Broseus's avatar Lucile Broseus

Update README.md

parent 720ae93c
......@@ -81,7 +81,7 @@ talc $LReads \ # File containg the long reads, in fasta of fastq forma
--reverse # Reverse complement Long Read sequences before correction
```
*Using known splice junctions*
**Using known splice junctions**
So as to integrate known splice junctions, you need create a dump file containing k-mers which flank splice junctions and specify
......@@ -96,3 +96,11 @@ talc $LReads \ # File containg the long reads, in fasta of fastq forma
________________________________________________________________________________
**OUTPUT**
----------------
Currently TALC outputs three files:
* A fasta file containing the corrected Long Read
* A .config.txt file summing up the input parameters
* A .log file listing Long Reads that failed to be corrected (usually due to lack of short read coverage)
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